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CAZyme Information: PHPALM_8820-t46_1-p1

You are here: Home > Sequence: PHPALM_8820-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_8820-t46_1-p1
CAZy Family GT71
CAZyme Description Hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
253 28079.18 5.1011
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_8820-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 237 3.3e-49 0.9102040816326531

CDD Domains      help

PHPALM_8820-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.38e-125 10 252 13 267
5.61e-121 10 252 13 267
1.13e-120 10 222 13 218
1.08e-108 14 183 16 185
3.29e-70 5 188 13 192

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.53e-23 19 182 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHPALM_8820-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.997877 0.002179

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_8820-t46_1-p1.