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CAZyme Information: PHPALM_7695-t46_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora palmivora | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora | |||||||||||
| CAZyme ID | PHPALM_7695-t46_1-p1 | |||||||||||
| CAZy Family | GT71 | |||||||||||
| CAZyme Description | Polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 73 | 387 | 8.9e-64 | 0.9538461538461539 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 5.43e-74 | 76 | 389 | 1 | 312 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 1.86e-27 | 128 | 389 | 141 | 386 | polygalacturonase |
| 178580 | PLN03003 | 5.61e-23 | 76 | 355 | 51 | 337 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 9.81e-23 | 76 | 350 | 80 | 370 | Probable polygalacturonase |
| 227721 | Pgu1 | 1.58e-22 | 126 | 311 | 199 | 399 | Polygalacturonase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.59e-249 | 1 | 389 | 1 | 391 | |
| 1.91e-226 | 1 | 359 | 1 | 361 | |
| 1.00e-204 | 1 | 389 | 1 | 390 | |
| 1.04e-204 | 1 | 389 | 1 | 391 | |
| 3.87e-175 | 61 | 389 | 38 | 366 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.02e-73 | 51 | 389 | 1 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 7.02e-73 | 51 | 389 | 1 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.52e-69 | 61 | 389 | 3 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.34e-69 | 61 | 389 | 4 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 3.54e-64 | 61 | 389 | 3 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.04e-72 | 38 | 389 | 11 | 367 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
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| 7.04e-72 | 38 | 389 | 11 | 367 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
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| 7.04e-72 | 38 | 389 | 11 | 367 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
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| 2.03e-71 | 51 | 389 | 21 | 368 | Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaI PE=3 SV=1 |
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| 5.72e-69 | 53 | 385 | 19 | 355 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000202 | 0.999742 | CS pos: 20-21. Pr: 0.9710 |