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CAZyme Information: PHPALM_7690-t46_1-p1

You are here: Home > Sequence: PHPALM_7690-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_7690-t46_1-p1
CAZy Family GT71
CAZyme Description Hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
259 28374.17 5.1973
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_7690-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 245 2.6e-71 0.926530612244898

CDD Domains      help

PHPALM_7690-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.98e-110 1 239 1 231
4.99e-108 5 238 4 248
4.99e-108 5 238 4 248
7.08e-108 5 238 4 248
2.87e-107 5 238 4 248

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.80e-18 23 190 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHPALM_7690-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000200 0.999789 CS pos: 22-23. Pr: 0.9798

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_7690-t46_1-p1.