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CAZyme Information: PHPALM_7374-t46_1-p1

You are here: Home > Sequence: PHPALM_7374-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_7374-t46_1-p1
CAZy Family GT7
CAZyme Description Hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
219 24132.87 5.7172
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_7374-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 18 211 1.1e-58 0.7918367346938775

CDD Domains      help

PHPALM_7374-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.43e-130 1 203 1 201
1.43e-130 1 203 1 201
1.10e-129 1 203 29 229
2.27e-129 1 203 60 260
2.12e-128 18 195 1 176

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.68e-32 28 188 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHPALM_7374-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000363 0.999605 CS pos: 27-28. Pr: 0.9705

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_7374-t46_1-p1.