CAZyme Information: PHPALM_6876-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_6876-t46_1-p1
• CAZy Family: GT62
• CAZyme Description: Hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
306		33090.18	4.4047

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01003594:275-1216(+)

Full Sequence      

MKVPTTILALATLTASVQAHGYISKPKATYEPNTIYSAYNALTTASVNKAFAGGRSEDSR
PLERKKEDSRLASEMMDPIAPDYGKSIKTATPVDVTGYTEMWWQNDEYKEGFIASHEGPC
EAWIDDVRIFHHDNCAAQFKTYPAKVPADYSSCKGECLFVFYWLALHEPNWQIYKQCVPI
TNSGSGAAPTTQSSAAEETSKDNDSQTSASTNNEESTTEQTGKDKDASDETQSDASTGDK
SPSTEQSTPTPEQTEAPATPAITSAPESTTTTPEVAEAPTAPEDTPATPTVTEAITTSKC
SVRRRI

Enzyme Prediction     

No EC number prediction in PHPALM_6876-t46_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	8	259	7.7e-57	0.9224489795918367

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
139494	PRK13335	1.03e-06	176	296	48	162	superantigen-like protein SSL3; Reviewed.
183558	PRK12495	7.22e-05	181	296	76	193	hypothetical protein; Provisional
236776	PRK10856	1.40e-04	205	298	148	237	cytoskeleton protein RodZ.
183558	PRK12495	1.73e-04	189	296	62	170	hypothetical protein; Provisional
237030	kgd	6.42e-04	222	304	39	121	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETM55515.1|AA17	4.46e-109	1	194	1	201
ETL49218.1|AA17	1.56e-107	1	195	1	202
ETI56039.1|AA17	2.21e-107	1	194	1	201
ETP53850.1|AA17	6.29e-107	1	194	1	201
ETP25843.1|AA17	6.29e-107	1	195	1	202

PDB Hits     

PHPALM_6876-t46_1-p1 has no PDB hit.

Swiss-Prot Hits     

PHPALM_6876-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000295	0.999649	CS pos: 19-20. Pr: 0.9784

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_6876-t46_1-p1.