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CAZyme Information: PHPALM_6362-t46_1-p1

You are here: Home > Sequence: PHPALM_6362-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_6362-t46_1-p1
CAZy Family GT60
CAZyme Description Hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
194 21920.12 4.5665
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_6362-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 162 2e-41 0.5877551020408164

CDD Domains      help

PHPALM_6362-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.81e-107 1 162 1 162
6.81e-107 1 162 1 162
2.67e-106 1 162 1 162
8.89e-100 1 162 19 180
8.09e-99 1 162 1 162

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.25e-11 23 151 1 121
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHPALM_6362-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000339 0.999635 CS pos: 22-23. Pr: 0.9791

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_6362-t46_1-p1.