logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHPALM_6114-t46_1-p1

You are here: Home > Sequence: PHPALM_6114-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_6114-t46_1-p1
CAZy Family GT57
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
293 31145.06 4.1675
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_6114-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 255 2.1e-67 0.9469387755102041

CDD Domains      help

PHPALM_6114-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.75e-135 1 197 1 197
5.53e-135 6 197 6 197
1.14e-131 6 197 6 197
2.21e-94 1 202 1 179
2.34e-86 7 202 8 207

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.86e-14 101 195 69 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHPALM_6114-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000218 0.999758 CS pos: 22-23. Pr: 0.9741

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_6114-t46_1-p1.