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CAZyme Information: PHPALM_5538-t46_1-p1

You are here: Home > Sequence: PHPALM_5538-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_5538-t46_1-p1
CAZy Family GT4
CAZyme Description Glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
155 17891.16 5.5914
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_5538-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 24 152 3.5e-18 0.6808510638297872

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395527 Ricin_B_lectin 1.39e-17 53 147 35 126
Ricin-type beta-trefoil lectin domain.
395527 Ricin_B_lectin 2.48e-11 66 149 4 84
Ricin-type beta-trefoil lectin domain.
238092 RICIN 1.60e-10 56 147 36 122
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
238092 RICIN 4.91e-10 71 155 8 88
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
214672 RICIN 3.49e-09 69 155 3 82
Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.72e-69 8 155 83 227
2.03e-62 1 155 292 443
2.03e-62 1 155 292 443
2.03e-62 1 155 292 443
2.03e-62 1 155 292 443

PDB Hits      help

PHPALM_5538-t46_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHPALM_5538-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000061 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_5538-t46_1-p1.