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CAZyme Information: PHPALM_5404-t46_1-p1
Basic Information
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| Species |
Phytophthora palmivora
|
| Lineage |
Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
|
| CAZyme ID |
PHPALM_5404-t46_1-p1
|
| CAZy Family |
GT4 |
| CAZyme Description |
Hypothetical protein
|
| CAZyme Property |
| Protein Length |
CGC |
Molecular Weight |
Isoelectric Point |
| 378 |
|
41785.56 |
4.2197 |
|
| Genome Property |
| Genome Version/Assembly ID |
Genes |
Strain NCBI Taxon ID |
Non Protein Coding Genes |
Protein Coding Genes |
| FungiDB-61_Ppalmivorasbr112.9 |
28185 |
N/A |
3511 |
24674
|
|
| Gene Location |
| Family |
Start |
End |
Evalue |
family coverage |
| GH30 |
138 |
368 |
5.8e-70 |
0.5241228070175439 |
| Cdd ID |
Domain |
E-Value |
qStart |
qEnd |
sStart |
sEnd |
Domain Description |
| 227807
|
XynC |
5.08e-09 |
85 |
374 |
78 |
356 |
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis]. |
| 405300
|
Glyco_hydr_30_2 |
1.21e-08 |
43 |
329 |
16 |
367 |
O-Glycosyl hydrolase family 30. |
| Hit ID |
E-Value |
Query Start |
Query End |
Hit Start |
Hit End |
| 6.03e-165 |
3 |
371 |
4 |
419 |
| 2.01e-116 |
23 |
378 |
29 |
426 |
| 6.84e-112 |
23 |
378 |
30 |
427 |
| 9.87e-109 |
23 |
378 |
30 |
427 |
| 9.87e-109 |
23 |
378 |
30 |
427 |
PHPALM_5404-t46_1-p1 has no PDB hit.
| Hit ID |
E-Value |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1.57e-80 |
25 |
365 |
19 |
389 |
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1 |
This protein is predicted as SP
| Other |
SP_Sec_SPI |
CS Position |
| 0.448492 |
0.551494 |
CS pos: 26-27. Pr: 0.2078 |
There is no transmembrane helices in PHPALM_5404-t46_1-p1.
