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CAZyme Information: PHPALM_3982-t46_1-p1

You are here: Home > Sequence: PHPALM_3982-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_3982-t46_1-p1
CAZy Family GT1
CAZyme Description Chitin-binding protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
331 34355.14 4.1472
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_3982-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 23 191 2.3e-20 0.9880239520958084

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
165021 PHA02638 1.38e-04 257 324 4 71
CC chemokine receptor-like protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.08e-14 12 198 5 188
8.41e-14 82 198 73 189
1.61e-13 6 197 2 195
2.07e-13 8 198 5 195
4.05e-13 10 197 6 195

PDB Hits      help

PHPALM_3982-t46_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHPALM_3982-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000305 0.999678 CS pos: 22-23. Pr: 0.9733

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_3982-t46_1-p1.