You are browsing environment: FUNGIDB
CAZyme Information: PHPALM_3981-t46_1-p1
You are here: Home > Sequence: PHPALM_3981-t46_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora palmivora | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora | |||||||||||
| CAZyme ID | PHPALM_3981-t46_1-p1 | |||||||||||
| CAZy Family | GT1 | |||||||||||
| CAZyme Description | Chitin-binding protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA16 | 2 | 166 | 1e-21 | 0.9640718562874252 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 397269 | LPMO_10 | 3.58e-05 | 63 | 167 | 82 | 186 | Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.41e-10 | 56 | 174 | 73 | 190 | |
| 3.51e-10 | 1 | 166 | 21 | 184 | |
| 8.65e-10 | 4 | 168 | 23 | 184 | |
| 5.55e-09 | 56 | 168 | 73 | 184 | |
| 5.55e-09 | 56 | 168 | 73 | 184 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000020 | 0.000003 |