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CAZyme Information: PHPALM_3957-t46_1-p1

You are here: Home > Sequence: PHPALM_3957-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_3957-t46_1-p1
CAZy Family GT1
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
754 NCKW01001984|CGC1 85857.78 8.2246
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 7 461 6.6e-168 0.9603729603729604

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
274539 BGL 0.0 8 462 1 424
beta-galactosidase.
395176 Glyco_hydro_1 0.0 7 461 5 441
Glycosyl hydrolase family 1.
225343 BglB 2.20e-162 7 461 4 443
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 1.73e-126 7 466 28 480
beta-glucosidase
215455 PLN02849 1.46e-110 7 466 30 480
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 462 1 462
8.93e-190 7 461 4 446
1.34e-187 7 462 4 447
4.50e-187 7 462 4 447
3.39e-186 7 462 4 447

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.62e-155 2 461 26 473
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
2.49e-148 2 461 6 438
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
4.09e-146 7 460 13 452
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_B Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_C Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8]
8.19e-136 8 461 10 452
Chain A, Beta-glucosidase [Phanerodontia chrysosporium],2E3Z_B Chain B, Beta-glucosidase [Phanerodontia chrysosporium],2E40_A Chain A, Beta-glucosidase [Phanerodontia chrysosporium],2E40_B Chain B, Beta-glucosidase [Phanerodontia chrysosporium]
2.47e-134 1 462 2 469
Trichoderma harzianum GH1 beta-glucosidase ThBgl2 [Trichoderma harzianum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.93e-139 7 461 15 464
Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1
3.82e-135 8 461 7 449
Beta-glucosidase 1A OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1A PE=1 SV=1
3.85e-134 7 461 44 500
Beta-glucosidase 44 OS=Arabidopsis thaliana OX=3702 GN=BGLU44 PE=2 SV=1
9.35e-134 8 460 12 463
Beta-glucosidase 1B OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1B PE=1 SV=1
4.51e-131 7 461 40 501
Beta-glucosidase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU11 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000031 0.000006

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_3957-t46_1-p1.