CAZyme Information: PHPALM_3536-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_3536-t46_1-p1
• CAZy Family: GH53
• CAZyme Description: Hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
276	NCKW01001884|CGC1	29258.01	4.4825

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01001884:1749-2579(-)

Full Sequence      

MVSTTSILALASAVAMSATSVQAHGYVENPESEFKDKKTSEWIVQIDPQWKGDWDNAKGD
DGLVALYKELKASNNAKDIRTLLDSDTKLYGADCGYTNPDVSPKDPPTDGTATFSRGIVH
AGPCEIWLDDKMVLQNDDCQSAYGDGTQETISVFKPVDYSSCASGGCMFRFYWLALQRLD
GKTYWQVYKNCIPLSGPAGGGASQTTPSTGNGSSTSQTSPSSGDSDSSKSQSTTTAPSSG
SSPSTESTPAPESPSVDTPEVTPAPSSKCNGRRKRD

Enzyme Prediction     

EC	1.14.99.-:4

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	13	252	5e-67	0.9306122448979591

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
237309	PRK13211	0.002	1	32	1	32	N-acetylglucosamine-binding protein GbpA.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETL85650.1|AA17	6.68e-151	1	276	1	276
ETK78976.1|AA17	2.22e-149	1	276	1	276
ETN19254.1|AA17	9.04e-149	1	276	1	276
ETM38805.1|AA17	2.59e-148	1	276	1	276
ETI38761.1|AA17	2.59e-148	1	276	1	276

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Z5Y_A	1.04e-95	24	196	1	172	Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits     

PHPALM_3536-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000346	0.999622	CS pos: 23-24. Pr: 0.9752

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_3536-t46_1-p1.