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CAZyme Information: PHPALM_346-t46_1-p1

You are here: Home > Sequence: PHPALM_346-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_346-t46_1-p1
CAZy Family GH5
CAZyme Description GlcNac transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
426 48447.98 8.6690
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_346-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 50 244 6.3e-24 0.6303030303030303

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 4.79e-10 111 327 96 349
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.35e-216 1 426 20 489
4.84e-199 1 426 1 471
4.99e-142 6 361 28 417
1.43e-103 17 362 39 420
1.33e-17 156 353 1 225

PDB Hits      help

PHPALM_346-t46_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHPALM_346-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000058 0.000001

TMHMM  Annotations      download full data without filtering help

Start End
387 409