CAZyme Information: PHPALM_31083-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_31083-t46_1-p1
• CAZy Family: GH5
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1314		146315.11	4.4279

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01016939:88-4231(+)

Full Sequence      

MMLHNPMKSNLCFDDGGGTDPGATRFVMWHCNNDSPNQHFEIMPRAAIMEERRQKRIAAG
LDDEIDLLNSGQKIMLRVRGKDNLCVDDGGGRWNGATKFNDQLCDPTSLNQVFTYDAKTR
QFRSVSKPGLCMDDGGAWNAAGSQAHLWDCDPNNQNQWFVWDEDTMMLRNPVKQNLCFDD
GGGTAPGQTKYVLWFCDNNNVNQHFEILSHAKMVEEKKNRLIAAGLDDDVDLLNSGQPIM
LRVRGKNNLCIDDGGGRWNGATKFVNQKCSPSSQNQLFTYDPSTRQFRSVNKPNLCMDDG
GGWNAAETTAHLWDCDPNNQNQWFVWDENTMMIRNPAKNNLCFDDGGGMTPGASRYWLWT
CDNNNPNQHFEVVSAASMMEEMKKERIAAGNTAVDILSTGQEVLLRVRGKDNLCVDDGGG
YSSGETKFVDQPCDPDSPNQIFTYNSMTHQFQSSYKPGMCIDDGGAWNAAGSQAHLWQCD
PNNQNQWFVMDDDTLMLHNPVKENLCFDDGGGTSPGATRYVLWFCSDDNPNQHFEVLPRA
AMLEEKRKKLSAAGIDNNINLLMSGQSIMLRVRGKNNVCVDDGGGHGNGETQFSAQQCDP
TSPNQIFSYDASTHQLRSINKPGMCMDDGGGWGPGQTPALARLWACDPSNENQWFILDQD
NMMFRNPVKDNLCLDDGSNHPLMKFWLNNCDTNSQNQHFEIISPASIPGIGAPNPDRLGM
KFLNILQSGNQVLIRSHSRNLCLDDGGGHSSGETKFVYQPCDPNSPNQIFSYDVNAREFR
SVNKGGMCLDDGGGWVAGASTAHLWQCDPGNENQWFELDPDTLMLHSPAKPGLCFGDDGG
MMNNFLLWDCNIDSPNQQFEILSRPWGTFYGNDQLLPPGPIEIDQPQPIDGGGMVVPPPD
IAIDEPVRYGTDQHWEGAPAGSFGTPEGIPHDNELPPSGPLVLPDQIDEHLPPPDVPVVA
KADMPFVTYGDGDWNLLAPSNDTVSLVNADDSTAISAAEIFKYLQTLKDRADMEHEVMMY
RYKRTYQCASAGLQTLAKDAVTPDEYHVLVQWMYDHCAAGATDVAPIENPSPPLTDDQLK
LDDVAPLVDDTDVKRQYMTKLEFYYEIKNHYALKSEELVGDAAVANLRAAETEKLEKKLA
DCIEEASERYGYKQDNMPNNSKDHLKDAISHVSGRTPPKPNMLRLQCLLSTGEDVRVVTI
EVSPDERISELQARLVEKLNSESWAKPDTVMKLYHVQHQQLTYRQDPTTKLEVLFLDGDK
ISRSDAATGIVRQKATQLVPWALVSWYFQDQTFIFPDAIDIVVVSGEDADEEIA

Enzyme Prediction     

No EC number prediction in PHPALM_31083-t46_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM13	243	392	5.3e-16	0.7606382978723404

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395527	Ricin_B_lectin	3.74e-19	242	370	4	126	Ricin-type beta-trefoil lectin domain.
395527	Ricin_B_lectin	7.14e-18	732	859	3	126	Ricin-type beta-trefoil lectin domain.
238092	RICIN	7.17e-16	241	371	3	123	Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
395527	Ricin_B_lectin	1.37e-15	77	205	4	126	Ricin-type beta-trefoil lectin domain.
238092	RICIN	9.84e-15	76	207	3	124	Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits     

PHPALM_31083-t46_1-p1 has no CAZyme hit.

PDB Hits     

PHPALM_31083-t46_1-p1 has no PDB hit.

Swiss-Prot Hits     

PHPALM_31083-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000045	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_31083-t46_1-p1.