CAZyme Information: PHPALM_30895-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_30895-t46_1-p1
• CAZy Family: GH5
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
282		30457.90	4.7886

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01016904:7098-7946(-)

Full Sequence      

MKTLTTILALATLTASVQAHGYISKPKATYEPNTIYTAYNALTTASVNKAFAGGKYDGSP
SQNTQVFNDRWNATGYKSLREMMDPIAPDYGKSIKTATPVDVTGYTEMWWQNDEYKEGFI
ASHEGPCEAWIDDVRIFHHDNCAAQFKTYPAKVPADYSSCKGECLFAFYWLALHEPNWQI
YKQCVPITNNGSGTTTQSSGSDETTSPVPTTDSPTITTATPEVTKAPVAPTSTPAPEVTN
ATPSPTKGASIPSPTPAPEVTYATPETTEVTPTPAAKDNCLM

Enzyme Prediction     

No EC number prediction in PHPALM_30895-t46_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	8	249	2.2e-72	0.9020408163265307

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
223033	PHA03291	6.30e-04	185	259	204	277	envelope glycoprotein I; Provisional
237030	kgd	0.001	199	258	40	99	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
237030	kgd	0.002	188	263	41	115	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
411345	gliding_GltJ	0.003	204	263	436	495	adventurous gliding motility protein GltJ. Adventurous gliding motility protein GltJ, also known as AgmX, occurs in delta-proteobacteria such as Myxococcus xanthus.
215130	PLN02217	0.004	187	261	562	638	probable pectinesterase/pectinesterase inhibitor

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETM55515.1|AA17	3.52e-128	1	198	1	200
ETL49218.1|AA17	1.92e-126	1	198	1	200
ETP25843.1|AA17	1.92e-126	1	198	1	200
ETI56039.1|AA17	1.92e-126	1	198	1	200
ETP53850.1|AA17	5.48e-126	1	198	1	200

PDB Hits     

PHPALM_30895-t46_1-p1 has no PDB hit.

Swiss-Prot Hits     

PHPALM_30895-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000223	0.999770	CS pos: 19-20. Pr: 0.9800

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_30895-t46_1-p1.