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CAZyme Information: PHPALM_30893-t46_1-p1

You are here: Home > Sequence: PHPALM_30893-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_30893-t46_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
311 33567.53 4.3203
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_30893-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 8 266 1.8e-66 0.9224489795918367

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
183558 PRK12495 1.65e-04 196 286 62 159
hypothetical protein; Provisional
139494 PRK13335 3.01e-04 183 287 48 155
superantigen-like protein SSL3; Reviewed.
226920 CobT2 3.95e-04 190 267 223 307
Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphorib... [Coenzyme transport and metabolism].
183558 PRK12495 0.002 188 288 76 172
hypothetical protein; Provisional
226406 COG3889 0.002 151 282 715 843
Predicted periplasmic protein [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.71e-128 1 198 1 198
2.02e-126 1 198 1 198
2.02e-126 1 198 1 198
5.78e-126 1 198 1 198
8.20e-126 1 198 1 198

PDB Hits      help

PHPALM_30893-t46_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHPALM_30893-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000250 0.999722 CS pos: 19-20. Pr: 0.9788

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_30893-t46_1-p1.