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CAZyme Information: PHPALM_29971-t46_1-p1

You are here: Home > Sequence: PHPALM_29971-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_29971-t46_1-p1
CAZy Family GH5
CAZyme Description Glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
217 24442.62 4.8745
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 18 217 2.8e-77 0.44988344988344986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 2.59e-77 19 217 5 198
Glycosyl hydrolase family 1.
225343 BglB 1.10e-72 19 217 4 201
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 4.40e-57 19 217 28 229
beta-glucosidase
215455 PLN02849 8.88e-57 1 217 12 231
beta-glucosidase
215539 PLN02998 2.30e-53 19 200 31 207
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.04e-110 1 217 15 230
1.91e-105 13 217 7 211
9.88e-86 13 217 17 221
3.44e-59 67 217 5 156
1.69e-57 6 217 19 253

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.01e-56 17 217 41 247
Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine [Rauvolfia serpentina],2JF6_B Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine [Rauvolfia serpentina],2JF7_A Structure of Strictosidine Glucosidase [Rauvolfia serpentina],2JF7_B Structure of Strictosidine Glucosidase [Rauvolfia serpentina],3ZJ7_A Crystal structure of strictosidine glucosidase in complex with inhibitor-1 [Rauvolfia serpentina],3ZJ7_B Crystal structure of strictosidine glucosidase in complex with inhibitor-1 [Rauvolfia serpentina],3ZJ8_A Crystal structure of strictosidine glucosidase in complex with inhibitor-2 [Rauvolfia serpentina],3ZJ8_B Crystal structure of strictosidine glucosidase in complex with inhibitor-2 [Rauvolfia serpentina]
1.62e-55 13 217 25 225
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
1.94e-55 19 217 11 204
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
3.62e-55 19 217 39 247
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
4.74e-55 19 217 6 199
Crystal structure of beta-glucosidase A from bacterium Clostridium cellulovorans [Clostridium cellulovorans],3AHX_B Crystal structure of beta-glucosidase A from bacterium Clostridium cellulovorans [Clostridium cellulovorans],3AHX_C Crystal structure of beta-glucosidase A from bacterium Clostridium cellulovorans [Clostridium cellulovorans],3AHX_D Crystal structure of beta-glucosidase A from bacterium Clostridium cellulovorans [Clostridium cellulovorans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.41e-57 17 217 72 278
Furcatin hydrolase OS=Viburnum furcatum OX=237940 PE=1 SV=1
1.42e-56 6 217 18 253
Beta-glucosidase 20 OS=Arabidopsis thaliana OX=3702 GN=BGLU20 PE=2 SV=1
5.18e-56 17 217 41 247
Strictosidine-O-beta-D-glucosidase OS=Rauvolfia serpentina OX=4060 GN=SGR1 PE=1 SV=1
1.55e-55 19 217 25 231
Beta-glucosidase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU25 PE=2 SV=2
1.72e-55 6 216 18 249
Beta-glucosidase 21 OS=Arabidopsis thaliana OX=3702 GN=BGLU21 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.871351 0.128670

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_29971-t46_1-p1.