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CAZyme Information: PHPALM_29099-t46_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora palmivora | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora | |||||||||||
| CAZyme ID | PHPALM_29099-t46_1-p1 | |||||||||||
| CAZy Family | GH43 | |||||||||||
| CAZyme Description | Glycoside hydrolase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH17 | 125 | 379 | 1.9e-20 | 0.977491961414791 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 227625 | Scw11 | 1.28e-22 | 121 | 375 | 43 | 304 | Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism]. |
| 366033 | Glyco_hydro_17 | 6.38e-06 | 309 | 379 | 231 | 304 | Glycosyl hydrolases family 17. |
| 311610 | Glyco_hydro_53 | 0.001 | 270 | 350 | 200 | 295 | Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1,4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold. |
| 226385 | GanB | 0.003 | 270 | 350 | 246 | 340 | Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.95e-120 | 120 | 390 | 569 | 841 | |
| 2.41e-115 | 125 | 383 | 29 | 288 | |
| 1.07e-67 | 125 | 383 | 29 | 288 | |
| 6.90e-49 | 125 | 295 | 29 | 200 | |
| 1.57e-46 | 125 | 391 | 22 | 292 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.89e-13 | 110 | 385 | 36 | 297 | Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.18e-12 | 100 | 382 | 4 | 303 | Glucan 1,3-beta-glucosidase BGL2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=BGL2 PE=1 SV=2 |
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| 3.12e-11 | 100 | 382 | 4 | 303 | Glucan 1,3-beta-glucosidase OS=Candida albicans OX=5476 GN=BGL2 PE=3 SV=1 |
|
| 4.90e-10 | 226 | 337 | 146 | 265 | Probable glucan endo-1,3-beta-glucosidase eglC OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=eglC PE=3 SV=2 |
|
| 1.79e-09 | 152 | 326 | 327 | 503 | Probable beta-glucosidase btgE OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=btgE PE=3 SV=1 |
|
| 3.84e-09 | 125 | 327 | 138 | 342 | Probable family 17 glucosidase SCW10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SCW10 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000051 | 0.000000 |