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CAZyme Information: PHPALM_2801-t46_1-p1

You are here: Home > Sequence: PHPALM_2801-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_2801-t46_1-p1
CAZy Family GH30
CAZyme Description Pleiotropic drug resistance protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
163 18591.61 6.2372
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 28 141 8.2e-33 0.3819444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178113 PLN02497 8.21e-23 30 140 180 287
probable pectinesterase
395871 Pectinesterase 2.69e-21 29 141 144 260
Pectinesterase.
178372 PLN02773 1.27e-19 29 121 159 250
pectinesterase
178051 PLN02432 2.76e-19 29 149 150 259
putative pectinesterase
215357 PLN02665 7.62e-19 29 141 216 322
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.00e-53 26 141 195 305
6.18e-49 26 121 196 291
2.53e-47 10 143 180 303
1.05e-46 26 141 193 304
1.99e-46 10 143 180 303

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.42e-21 30 119 156 247
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
3.42e-21 30 119 156 247
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.14e-12 30 123 152 255
Pectin methylesterase from Carrot [Daucus carota]
3.58e-11 29 123 147 251
Chain A, Pectinesterase 1 [Solanum lycopersicum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.12e-25 26 119 178 273
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1
4.91e-24 24 121 171 275
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
5.00e-23 29 121 177 276
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
2.41e-21 30 117 181 270
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
2.41e-21 30 117 181 270
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000022 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_2801-t46_1-p1.