logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHPALM_20936-t46_1-p1

You are here: Home > Sequence: PHPALM_20936-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_20936-t46_1-p1
CAZy Family GH3
CAZyme Description Hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
340 NCKW01011372|CGC1 38848.46 6.3655
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_20936-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT71 91 335 1.1e-42 0.9053030303030303

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
402574 Mannosyl_trans3 1.05e-24 91 330 2 242
Mannosyltransferase putative. This family is conserved in fungi. Several members are annotated as being alpha-1,3-mannosyltransferase but this could not be confirmed.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.30e-78 91 336 66 316
1.55e-76 42 338 83 385
5.09e-71 92 336 60 302
7.50e-45 91 339 92 341
3.00e-39 52 339 21 334

PDB Hits      help

PHPALM_20936-t46_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.08e-10 88 338 195 449
Probable alpha-1,3-mannosyltransferase MNT4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNT4 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999995 0.000009

TMHMM  Annotations      download full data without filtering help

Start End
23 42