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CAZyme Information: PHPALM_1997-t46_1-p1

You are here: Home > Sequence: PHPALM_1997-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_1997-t46_1-p1
CAZy Family GH28
CAZyme Description Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
375 44034.13 7.1368
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.122:25

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT31 115 270 3.3e-16 0.7395833333333334

CDD Domains      help

PHPALM_1997-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.01e-127 101 373 1 276
1.07e-108 25 373 20 361
1.82e-107 15 373 8 348
9.47e-88 32 352 26 307
4.53e-49 70 340 54 334

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.48e-36 70 351 28 270
Chain A, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Drosophila melanogaster],7Q4I_B Chain B, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Drosophila melanogaster]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.56e-35 70 351 100 342
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Drosophila melanogaster OX=7227 GN=C1GalTA PE=2 SV=1
3.68e-31 70 348 105 344
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Caenorhabditis elegans OX=6239 GN=C38H2.2 PE=2 SV=2
2.26e-28 60 351 73 328
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Gallus gallus OX=9031 GN=C1GALT1 PE=2 SV=1
2.21e-27 42 351 54 327
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Bos taurus OX=9913 GN=C1GALT1 PE=2 SV=1
1.80e-25 42 351 54 327
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Homo sapiens OX=9606 GN=C1GALT1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001069 0.998900 CS pos: 24-25. Pr: 0.9715

TMHMM  Annotations      download full data without filtering help

Start End
5 27