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CAZyme Information: PHPALM_1979-t46_1-p1

You are here: Home > Sequence: PHPALM_1979-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_1979-t46_1-p1
CAZy Family GH18
CAZyme Description Glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
513 57875.04 4.8876
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 46 399 2.9e-77 0.7622377622377622

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 1.46e-72 51 294 69 306
Glycosyl hydrolase family 1.
215455 PLN02849 4.79e-56 3 296 1 342
beta-glucosidase
215435 PLN02814 1.55e-54 10 290 7 334
beta-glucosidase
225343 BglB 3.60e-54 52 308 71 325
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215539 PLN02998 8.11e-49 37 293 80 343
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.21e-173 46 513 13 503
4.74e-120 21 398 25 463
2.89e-115 21 398 6 444
1.31e-112 22 398 17 453
7.51e-56 46 398 63 419

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.54e-52 46 296 72 315
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_B Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_C Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8]
1.64e-50 16 297 71 359
Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine [Rauvolfia serpentina],2JF6_B Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine [Rauvolfia serpentina],2JF7_A Structure of Strictosidine Glucosidase [Rauvolfia serpentina],2JF7_B Structure of Strictosidine Glucosidase [Rauvolfia serpentina],3ZJ7_A Crystal structure of strictosidine glucosidase in complex with inhibitor-1 [Rauvolfia serpentina],3ZJ7_B Crystal structure of strictosidine glucosidase in complex with inhibitor-1 [Rauvolfia serpentina],3ZJ8_A Crystal structure of strictosidine glucosidase in complex with inhibitor-2 [Rauvolfia serpentina],3ZJ8_B Crystal structure of strictosidine glucosidase in complex with inhibitor-2 [Rauvolfia serpentina]
9.70e-49 30 285 78 343
Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTK_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa]
1.04e-48 46 409 81 453
Chain A, Beta-glucosidase 42 [Arabidopsis thaliana]
1.39e-48 46 296 99 358
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.31e-55 49 360 91 408
Beta-glucosidase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU27 PE=2 SV=1
3.03e-53 30 406 91 487
Myrosinase 5 OS=Arabidopsis thaliana OX=3702 GN=TGG5 PE=1 SV=1
1.02e-52 24 389 57 444
Beta-glucosidase 27 OS=Arabidopsis thaliana OX=3702 GN=BGLU27 PE=2 SV=2
1.60e-52 30 285 84 348
Beta-glucosidase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU11 PE=3 SV=2
6.51e-52 16 398 65 474
Beta-glucosidase 32 OS=Arabidopsis thaliana OX=3702 GN=BGLU32 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000269 0.999709 CS pos: 22-23. Pr: 0.9783

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_1979-t46_1-p1.