CAZyme Information: PHPALM_19629-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_19629-t46_1-p1
• CAZy Family: GH18
• CAZyme Description: GlcNac transferase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
459		52084.14	8.8824

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01011052:13563-14954(+)

Full Sequence      

MMKSGFESTMGIVETNRSSTQHIPLNPSQSHLRPPPPRVPNDPTLFVGLSVFRDGYRCAK
TNFTGLKRATNPNNVVFGLIKCTHLTKNVWMHFVSWLQNSVLIRITFESMNVQRESRGPT
LARHQQQKLIQDEEFCLQLDGHSIFTNGWDENLLKEWKGIGNEMAVMTTYIHHIHIFVVD
NGDNVPPKKLELPHLCTTMRGVNGLVRTVGASMIGGSKMPQLEALWGAGFSYNKCQAEKR
VPVDSHTLWIFDGEEFLRASRLWTHGYDMYSPSTLGTVVYHTYTSVSARFEGIPVEQKIK
DKEEEMGINRFKLLVGQSFEGRVSTIELDKFGFGNVRSFKQYLEFSGVTFDEGKKDAESC
EQRHWVPYSNATDVEEIVGGGWKLYDTNTPKSSRQNDLEIAGRLRQRVPDNVNTNTFTSL
LSVFVVVGIAVFVVAFSNNSFSRRIRRHVRSKAQHNSSE

Enzyme Prediction     

No EC number prediction in PHPALM_19629-t46_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT60	44	350	9.1e-48	0.9939393939393939

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
371506	GlcNAc	1.02e-30	116	350	108	349	Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QVE55543.1|GT60	1.21e-238	1	459	20	489
UIZ25301.1|GT60	3.89e-221	1	447	1	460
UIZ22573.1|GT60	3.13e-162	7	446	29	488
UIZ25379.1|GT60	4.12e-124	19	449	46	512
AFJ68853.1|GT60	6.27e-32	149	376	1	225

PDB Hits     

PHPALM_19629-t46_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q8T1C6|GNT1_DICDI	5.92e-13	115	283	76	249	[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase OS=Dictyostelium discoideum OX=44689 GN=gnt1 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000091	0.000000

TMHMM  Annotations     

Start	End
420	442