logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHPALM_19468-t46_1-p1

You are here: Home > Sequence: PHPALM_19468-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_19468-t46_1-p1
CAZy Family GH17
CAZyme Description Beta glucosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
346 39151.98 6.6335
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 17 333 4.2e-87 0.6386946386946387

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 3.52e-100 17 334 153 453
Glycosyl hydrolase family 1.
225343 BglB 7.71e-66 21 333 160 454
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 2.48e-57 17 325 173 476
beta-glucosidase
215455 PLN02849 7.93e-53 17 327 175 478
beta-glucosidase
184102 PRK13511 2.79e-49 21 325 152 459
6-phospho-beta-galactosidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.92e-127 17 336 157 475
9.06e-99 17 332 153 456
1.50e-97 17 336 155 463
2.24e-96 9 334 134 458
1.79e-95 17 334 153 458

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.80e-85 24 331 186 482
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
6.66e-76 17 325 172 476
Chain A, Beta-glucosidase 42 [Arabidopsis thaliana]
8.67e-74 17 335 161 466
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_B Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_C Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8]
1.09e-70 17 322 161 452
Chain A, Beta-glucosidase [Phanerodontia chrysosporium],2E3Z_B Chain B, Beta-glucosidase [Phanerodontia chrysosporium],2E40_A Chain A, Beta-glucosidase [Phanerodontia chrysosporium],2E40_B Chain B, Beta-glucosidase [Phanerodontia chrysosporium]
8.93e-70 17 329 169 479
Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group],4QLL_B Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.34e-75 17 325 171 475
Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1
1.87e-72 17 325 165 467
Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1
5.20e-70 17 322 158 449
Beta-glucosidase 1A OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1A PE=1 SV=1
9.93e-70 17 325 248 556
Furostanol glycoside 26-O-beta-glucosidase OS=Hellenia speciosa OX=49577 GN=F26G PE=1 SV=1
3.11e-68 17 329 192 502
Beta-glucosidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU7 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000052 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_19468-t46_1-p1.