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CAZyme Information: PHPALM_16130-t46_1-p1

You are here: Home > Sequence: PHPALM_16130-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_16130-t46_1-p1
CAZy Family GH1
CAZyme Description Putative endoglucanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
237 25229.35 9.4309
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4:15 3.2.1.151:9

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH12 88 236 3.3e-46 0.9871794871794872

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396303 Glyco_hydro_12 1.51e-53 30 237 1 207
Glycosyl hydrolase family 12.
235746 PRK06215 1.50e-18 3 192 14 193
hypothetical protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.00e-142 1 237 1 237
1.93e-120 1 237 1 241
1.93e-120 1 237 1 241
1.48e-119 4 237 5 239
6.75e-95 1 176 1 180

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.25e-92 18 236 5 221
Crystal structure of xeg-edgp [Aspergillus aculeatus],3VLB_D Crystal structure of xeg-edgp [Aspergillus aculeatus]
2.84e-92 18 236 12 228
Crystal structure of XEG [Aspergillus aculeatus],3VL9_A Crystal structure of xeg-xyloglucan [Aspergillus aculeatus],3VL9_B Crystal structure of xeg-xyloglucan [Aspergillus aculeatus]
6.69e-82 16 236 23 242
Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus],4NPR_B Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus]
5.62e-60 18 236 1 218
Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 [Aspergillus aculeatus],5GM3_B Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 [Aspergillus aculeatus]
4.53e-59 18 236 1 218
Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 in complex with cellotetrose [Aspergillus aculeatus],5GM4_B Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 in complex with cellotetrose [Aspergillus aculeatus],5GM4_C Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 in complex with cellotetrose [Aspergillus aculeatus],5GM4_D Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 in complex with cellotetrose [Aspergillus aculeatus],5GM4_E Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 in complex with cellotetrose [Aspergillus aculeatus],5GM4_F Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 in complex with cellotetrose [Aspergillus aculeatus],5GM4_G Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 in complex with cellotetrose [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.41e-144 1 237 1 238
Inactive glycoside hydrolase XLP1 OS=Phytophthora parasitica (strain INRA-310) OX=761204 GN=XLP1 PE=1 SV=1
3.43e-121 1 237 1 241
Xyloglucan-specific endo-beta-1,4-glucanase 1 OS=Phytophthora sojae (strain P6497) OX=1094619 GN=XEG1 PE=1 SV=1
3.80e-118 1 237 1 241
Xyloglucan-specific endo-beta-1,4-glucanase 1 OS=Phytophthora parasitica (strain INRA-310) OX=761204 GN=XEG1 PE=1 SV=1
1.20e-95 1 176 1 180
Inactive glycoside hydrolase XLP1 OS=Phytophthora sojae (strain P6497) OX=1094619 GN=XLP1 PE=1 SV=1
1.98e-91 18 236 21 237
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus aculeatus OX=5053 GN=xgeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000192 0.999774 CS pos: 18-19. Pr: 0.9788

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_16130-t46_1-p1.