CAZyme Information: PHPALM_1550-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_1550-t46_1-p1
• CAZy Family: CE8
• CAZyme Description: Putative Glycosyl hydrolase family 17 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
541		59438.11	4.1340

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01000374:2341-4941(-)

Full Sequence      

METLVQVTKSVRFYGLGDCDQSTMAVPAAINAGLSVSLGVWVNDDEAVFESEFTKLQTLL
KDHSTIFSQGNIVSIHVGSEAIYRKEVTAAKNIEYLQRVKALLTAYGLESVPVTIAEIGD
VYLAHPELTDAVDFVEANGFPFWERINIQNAVNYLKSRMTPLFQQALARDKKVVIGETGW
ASGGSSPRASFASPSNAATYFRGFYNWAIEQGIEFYYFEGFDEEWKIAATDDTVEGYFGL
FHADGTLKTEIADLQLGPSCTNEDASAGGYTPVPTTRPEGCRVNLKKYKMVHVTGTSLIL
AALITVATTSIEAVAFNCPDINYNIRTGADWAIAEDKCKPASQIAKIHKMCSDNGGTADI
PLTIIDVDSTYLEYPDLIDERIVDLTATYDGDKSVVIGEIGWVTNGSDPRASEATPENSA
EYFHDFYLQAQEQNISFYYFSAFDEAWKGTDTVEAYFGLFYANGEMKPIIAELELDDEVT
ATGSSTKREVVTPSPEAEAKEETVELLETERKSSSSIANTREDDEENSAVISSDQKNCAM
E

Enzyme Prediction     

No EC number prediction in PHPALM_1550-t46_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH17	11	248	2.9e-27	0.887459807073955

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
227625	Scw11	1.25e-43	1	244	69	304	Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033	Glyco_hydro_17	2.80e-14	8	248	37	304	Glycosyl hydrolases family 17.
227625	Scw11	7.17e-12	378	463	217	304	Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033	Glyco_hydro_17	1.91e-07	376	467	210	304	Glycosyl hydrolases family 17.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAJ90910.1|GH17	5.41e-69	1	252	58	310
AAM18482.1|GH17	5.50e-64	7	280	64	340
UIZ28880.1|GH17	2.47e-63	3	251	48	297
AIG56195.1|GH17	3.07e-57	4	280	53	340
CCA22143.1|GH17	3.86e-55	1	278	56	345

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WTP_A	8.07e-27	8	251	66	292	Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]
4WTR_A	5.20e-26	8	251	66	292	Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P43070|BGL2_CANAX	2.78e-22	1	251	45	303	Glucan 1,3-beta-glucosidase OS=Candida albicans OX=5476 GN=BGL2 PE=3 SV=1
sp|Q5AMT2|BGL2_CANAL	1.27e-21	1	251	45	303	Glucan 1,3-beta-glucosidase BGL2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=BGL2 PE=1 SV=2
sp|O13990|BGL2_SCHPO	9.66e-21	2	263	66	321	Glucan 1,3-beta-glucosidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bgl2 PE=2 SV=4
sp|P15703|BGL2_YEAST	4.32e-19	1	251	50	308	Glucan 1,3-beta-glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BGL2 PE=1 SV=1
sp|B0Y429|BTGC_ASPFC	1.09e-16	1	248	413	674	Probable glucan endo-1,3-beta-glucosidase btgC OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=btgC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000060	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_1550-t46_1-p1.