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CAZyme Information: PHPALM_1507-t46_1-p1

You are here: Home > Sequence: PHPALM_1507-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_1507-t46_1-p1
CAZy Family CE5
CAZyme Description Pectinesterase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
259 29056.49 4.5189
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 54 180 6.8e-31 0.4236111111111111

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215357 PLN02665 1.74e-25 95 234 160 340
pectinesterase family protein
178051 PLN02432 1.22e-23 51 237 56 275
putative pectinesterase
395871 Pectinesterase 1.71e-22 77 232 75 276
Pectinesterase.
215173 PLN02304 1.79e-22 96 235 172 355
probable pectinesterase
177848 PLN02197 7.62e-22 80 254 355 571
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.34e-96 54 259 101 347
9.81e-96 58 259 108 348
4.54e-94 35 259 84 348
4.73e-93 41 259 88 344
1.34e-92 41 259 88 344

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.73e-29 56 258 72 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
7.73e-29 56 258 72 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.19e-17 73 232 74 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]
3.69e-13 56 232 64 283
Pectin methylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.26e-37 58 258 94 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
5.88e-37 81 258 116 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
5.88e-37 81 258 116 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
2.64e-36 54 259 90 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
6.26e-36 81 258 116 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000068 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_1507-t46_1-p1.