CAZyme Information: PHPALM_14848-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_14848-t46_1-p1
• CAZy Family: AA6
• CAZyme Description: Hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
442		44720.40	4.0638

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01007998:7270-8598(+)

Full Sequence      

MISPVKCLLISALGATVVNGHGWMTKPAATFSAEAGDKSQFIATIESSSSGLKGTFNTAP
ADNVASFTKAFGSSKYKSLKELIDDKAKITVTGATLTCGTAEPDATPQPLPATVEWSHSD
SEGFTPSHEGPCEVWCDNVRAFQDENCAANFKSAPAELPYEKSKCTGASKLTFYWMAMHG
PTWQVYVNCAPLSGGSGGSTTQSSGSTSTTTTDSSSAESPAAQTPSSGGSPSTPTTDSSS
AGSPAAQTPSTGGSPSTPTADSPSADTPTVTAAPSSGGSPSTTTAPSSNTSPSTSTTTAP
STSTTTDESDCGSYDVAGSDEDCGSYDVAGGSGDDGKEQPTTGGNTYQQGSTNNGDNIYQ
QQQGSTNTGGGNTNQWTNTGGNTNQWTNTGGNTNQWTNTGGNTGTGQQQNTYQNTGTGSQ
NSFDFNTFQGTTNAGTVAPQNM

Enzyme Prediction     

No EC number prediction in PHPALM_14848-t46_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	13	264	7.6e-69	0.9102040816326531

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
236776	PRK10856	0.002	219	285	170	236	cytoskeleton protein RodZ.
237030	kgd	0.002	221	285	34	97	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
184923	PRK14959	0.003	217	332	381	512	DNA polymerase III subunits gamma and tau; Provisional
223021	PHA03247	0.003	217	285	2731	2798	large tegument protein UL36; Provisional
289042	MSA-2c	0.007	223	279	152	207	Merozoite surface antigen 2c. This family of proteins is found in eukaryotes. Proteins in this family are typically between 263 and 318 amino acids in length. There is a conserved SFT sequence motif. MSA-2 is a plasma membrane glycoprotein which can be found in Babesia bovis species.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETN20068.1|AA17	6.50e-111	1	224	1	224
ETI41700.1|AA17	9.51e-111	1	224	1	224
ETP39568.1|AA17	7.82e-110	1	224	13	236
ETM41632.1|AA17	7.82e-110	1	223	13	235
ETP11442.1|AA17	2.15e-109	1	223	1	223

PDB Hits     

PHPALM_14848-t46_1-p1 has no PDB hit.

Swiss-Prot Hits     

PHPALM_14848-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000290	0.999651	CS pos: 20-21. Pr: 0.9768

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_14848-t46_1-p1.