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CAZyme Information: PHPALM_14573-t46_1-p1

You are here: Home > Sequence: PHPALM_14573-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_14573-t46_1-p1
CAZy Family AA6
CAZyme Description Hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
308 32808.98 4.4927
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_14573-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 10 250 3e-69 0.9714285714285714

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
139494 PRK13335 4.32e-05 189 308 55 178
superantigen-like protein SSL3; Reviewed.
237019 PRK11907 7.06e-05 186 295 18 127
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.
411474 fibronec_FbpA 8.90e-05 192 299 138 257
LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
236776 PRK10856 1.65e-04 187 275 156 247
cytoskeleton protein RodZ.
237555 PRK13914 5.56e-04 200 308 231 344
invasion associated endopeptidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.50e-134 1 304 7 301
4.93e-134 1 304 1 295
8.10e-133 1 304 1 295
9.99e-133 1 304 7 301
2.32e-132 1 304 1 295

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.58e-26 23 188 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHPALM_14573-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000200 0.999790 CS pos: 22-23. Pr: 0.9788

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_14573-t46_1-p1.