logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHPALM_14507-t46_1-p1

You are here: Home > Sequence: PHPALM_14507-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_14507-t46_1-p1
CAZy Family AA3
CAZyme Description Pectinesterase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
179 19815.33 5.2383
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 45 178 2.2e-35 0.46875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215357 PLN02665 2.19e-17 62 178 160 279
pectinesterase family protein
178372 PLN02773 3.61e-17 73 178 117 221
pectinesterase
178113 PLN02497 9.88e-17 78 178 142 245
probable pectinesterase
178051 PLN02432 2.70e-15 63 178 101 211
putative pectinesterase
215367 PLN02682 1.37e-14 46 178 153 286
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.51e-69 26 178 108 262
4.27e-69 26 178 109 262
4.70e-66 35 170 133 269
9.72e-65 26 178 106 261
1.30e-64 26 178 106 258

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.74e-23 48 178 91 220
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.74e-23 48 178 91 220
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.17e-09 67 178 105 224
Pectin methylesterase from Carrot [Daucus carota]
7.40e-09 40 137 74 168
Chain A, Pectinesterase 1 [Solanum lycopersicum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.60e-29 48 178 116 245
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.60e-29 48 178 116 245
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
3.13e-29 48 178 116 245
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
3.54e-29 47 171 111 236
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
6.14e-29 48 178 116 245
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.956170 0.043816

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_14507-t46_1-p1.