logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHPALM_14422-t46_1-p1

You are here: Home > Sequence: PHPALM_14422-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_14422-t46_1-p1
CAZy Family AA3
CAZyme Description Hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
509 57323.72 4.3146
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 32 494 4.8e-129 0.9813519813519813

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 1.59e-140 33 495 5 450
Glycosyl hydrolase family 1.
274539 BGL 2.96e-118 34 489 1 426
beta-galactosidase.
225343 BglB 1.11e-115 33 503 4 460
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215455 PLN02849 7.32e-84 33 490 30 477
beta-glucosidase
215435 PLN02814 3.68e-82 33 463 28 462
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.15e-192 32 499 22 507
6.76e-190 32 503 31 520
4.54e-187 32 502 12 500
3.07e-113 82 499 5 419
1.24e-96 33 471 45 503

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.75e-94 33 463 39 488
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
2.24e-91 33 461 20 461
Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGL_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_A Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],7BZM_A Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group],7BZM_B Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group]
2.37e-91 31 501 9 453
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
6.25e-91 33 461 20 461
Crystal structure of rice BGlu1 E176Q mutant in complex with laminaribiose [Oryza sativa Japonica Group],3AHT_B Crystal structure of rice BGlu1 E176Q mutant in complex with laminaribiose [Oryza sativa Japonica Group],3AHV_A Semi-active E176Q mutant of rice bglu1 covalent complex with 2-deoxy-2-fluoroglucoside [Oryza sativa Japonica Group],3AHV_B Semi-active E176Q mutant of rice bglu1 covalent complex with 2-deoxy-2-fluoroglucoside [Oryza sativa Japonica Group],3F4V_A Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F4V_B Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5J_A Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5J_B Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5K_A Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5K_B Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5L_A Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5L_B Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group]
1.24e-90 33 461 20 461
Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group],4QLL_B Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.33e-93 33 489 40 504
Beta-glucosidase 17 OS=Arabidopsis thaliana OX=3702 GN=BGLU17 PE=2 SV=1
2.35e-92 33 463 31 485
Beta-glucosidase 30 OS=Arabidopsis thaliana OX=3702 GN=BGLU30 PE=2 SV=1
1.83e-91 33 492 25 493
Beta-glucosidase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU25 PE=2 SV=2
3.54e-91 33 460 32 478
Beta-glucosidase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU30 PE=2 SV=1
5.57e-91 33 461 43 484
Beta-glucosidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU7 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.895074 0.104934

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_14422-t46_1-p1.