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CAZyme Information: PHPALM_14227-t46_1-p1

You are here: Home > Sequence: PHPALM_14227-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_14227-t46_1-p1
CAZy Family AA2|AA2
CAZyme Description Glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
342 36578.36 4.3547
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.40:5

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 7 283 5.9e-38 0.501984126984127

CDD Domains      help

PHPALM_14227-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.17e-61 2 302 355 647
1.95e-59 2 334 352 668
7.95e-59 2 285 352 623
9.66e-59 2 334 354 670
1.33e-58 2 319 355 650

PDB Hits      help

PHPALM_14227-t46_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHPALM_14227-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.997600 0.002458

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_14227-t46_1-p1.