CAZyme Information: PHPALM_1248-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_1248-t46_1-p1
• CAZy Family: AA17
• CAZyme Description: Glycosyl transferase family 90 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
722		85187.55	8.0054

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01000256:1-2242(+)

Full Sequence      

PKFATKAECEDFIRKHCWRGSNPDFPKLQHVFSMLVDWQQITEILIPKIKEYDVKFPVDP
TPEISADNRFTQGEGLPIAEDVDYRVKMPFHQQTNRESTFNTLRYLFFHMRCGIFVMIRR
RRVVIFAPFANKDYENNWGQNVTFDSSDGSMFAYYREKQRYYRRENIIPDVNKWWANGNI
ICNEHCRYRNKEDETQYWGDQFLTQLRDMLEDACKYRNIADCEFFINKRDYPHLKENLSE
PYGFLFDKDDRNPDDDIPLTDHLYATYAPIMSFYVSKRFADIPFPCSEDWEAATGLVFPQ
SFRHTHCDQCPCRNPMHCENDWECFCDVGANGRKRHGIEGARDLFTAHNFQKFYKPWEDK
VNTAFFRGSATGGGTTIETNQRLHLAHLSNTWKNDRTMNGEAERDAAGEENMGEDLVPLL
NAEVTTWNLRDKKIAGKPMTFLHHEDFIFEGGRQHFIPIYEQSTFKYILYVEGHCAANRY
AFLMRLGSVILKVESRCVADEMWYYPILKPFEDHVPIKADLSDLAEKIRWCRENDDKCQR
IAARANELYERFVGKEAIHDYMEVICNRVAQRFQTAPKWYKRPTDVESMKKPNFGRCRGT
CVGGANGRYCKRCIEMKDNDEEERAKRERERESSRDGDRGRGGNSVYNKYGRDRSRDRYS
RGGSRSDDYDRRDRGYGGNSDRERYNRDSKQHGDGSPKRQRVQQCRKCRRAKSACQCSFR
GR

Enzyme Prediction     

No EC number prediction in PHPALM_1248-t46_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT90	220	567	1e-28	0.956

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
214773	CAP10	4.75e-24	219	562	2	242	Putative lipopolysaccharide-modifying enzyme.
310354	Glyco_transf_90	2.60e-17	356	598	154	350	Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ26993.1|GT0	0.0	1	721	34	761
CCA22368.1|GT0	2.39e-160	1	617	40	604
ARF10830.1|GT90	2.20e-107	1	569	25	505
UPA43649.1|GT0	3.56e-64	91	563	92	491
UPA43811.1|GT0	3.56e-64	91	563	92	491

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5L0R_A	2.35e-11	219	563	94	332	human POGLUT1 in complex with Notch1 EGF12 and UDP [Homo sapiens],5L0S_A human POGLUT1 in complex with Factor VII EGF1 and UDP [Homo sapiens],5L0T_A human POGLUT1 in complex with EGF(+) and UDP [Homo sapiens],5L0U_A human POGLUT1 in complex with EGF(+) and UDP-phosphono-glucose [Homo sapiens],5L0V_A human POGLUT1 in complex with 2F-glucose modified EGF(+) and UDP [Homo sapiens],5UB5_A human POGLUT1 in complex with human Notch1 EGF12 S458T mutant and UDP [Homo sapiens]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|O55767|VF179_IIV6	3.02e-63	59	575	48	527	Uncharacterized protein 179R OS=Invertebrate iridescent virus 6 OX=176652 GN=IIV6-179R PE=4 SV=1
sp|Q197C5|VF179_IIV3	1.20e-54	3	573	7	493	Uncharacterized protein 035R OS=Invertebrate iridescent virus 3 OX=345201 GN=IIV3-035R PE=4 SV=1
sp|Q6GZU9|027R_FRG3G	1.83e-33	98	583	38	454	Uncharacterized protein 027R OS=Frog virus 3 (isolate Goorha) OX=654924 GN=FV3-027R PE=4 SV=1
sp|Q7Z4H8|PLGT3_HUMAN	3.53e-13	450	578	352	477	Protein O-glucosyltransferase 3 OS=Homo sapiens OX=9606 GN=POGLUT3 PE=1 SV=2
sp|Q566E5|PLGT3_RAT	8.20e-13	450	577	353	477	Protein O-glucosyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Poglut3 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000073	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_1248-t46_1-p1.