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CAZyme Information: PHPALM_11553-t46_1-p1

You are here: Home > Sequence: PHPALM_11553-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_11553-t46_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
216 NCKW01006404|CGC1 24118.68 4.5832
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_11553-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 188 3.3e-61 0.6938775510204082

CDD Domains      help

PHPALM_11553-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.66e-134 1 188 19 206
1.46e-133 1 188 1 188
7.82e-133 1 188 19 206
8.44e-133 1 188 1 188
2.41e-132 1 188 1 188

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.05e-17 23 193 1 173
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHPALM_11553-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000259 0.999710 CS pos: 22-23. Pr: 0.9798

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_11553-t46_1-p1.