CAZyme Information: PHPALM_1013-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_1013-t46_1-p1
• CAZy Family: AA1
• CAZyme Description: Family 3 putative Glycosyl hydrolase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1212		134135.13	4.6268

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01000180:156-5410(-)

Full Sequence      

MTQLDLSTIMIHEDKWTTTRTVNETALRAYAKMNIGSYFNTNWGDKAIMGRYSYNASEFR
SLIQHIQEVSMEENGGHPVIYGLDSIHGASYVSGAVLVPHQINQGASFNPDLVYEMGRIT
SRDTEAAGASWIFGPILDISQNSMWARTLETYGEDSYLTSIMGASYIRGLQSYNQTAACV
KHFLGYSKTPTGHDRDAVNMPDFDLLNYFMPPYKAAFEAGALSVMENYVSLNGDPVVASS
KILKDLIRTDLGFDGVLVTDWMEIYNMYEFHRVASTRQEAVSTSLQHTSIDMSMVPSDAD
FIEYALNMLEEHPEQEARLRESAKRVIKLKLQLGLYDNPVPGENYVSMVGNKKDEEAALE
MARESIVLLKNEDDVLPLQKGASVFLTGHSADNVGLQCGGWTWTWQGHTGNEMFQHGISV
RKGLENLVGNKSFTYFNGLLVNGSISDTNLTKAVELASQHEYTIIAIGEANYAEKPGDID
DPSLPEGQVKYVETLAATGTKVIVILFEGRPRLLGSIPDNAAAIIDGMLPCELGGQAMAE
ILYGDVNPSGKLPITYPKDPANIAIPYNHRVTTRCMWDNCWMQWDFGAGLSYTKFNYSSV
TLDKTTIANADDTLTATVTVTNTGSRAGKETVMLFLIQPFRKISVPEMKMLKKFKKIELQ
AGESTDVSFSLSAEDWGVYEPQIGKGLKRIVEDSKYVVAVKPDTWCDVYNNITNPLCAEF
TIDTSSVAADAYDAKAQAIVDSFTPEQLVGQMTQLTLSTVMDETTRELNETAVRSFAQLH
VGSYLNTFWDKPINGSYGYNASEFRSIIQRIQEISMEENGGHPILYGIDSVHGANYVDGS
VLMPHQINSGASFNPDLVYEVARITARDTEAAGISWIFGPILDISQNTLWARTHETFGED
PYLASVMGAALVRGLQSYNQTAACIKHFIGYSKTPTGHDRDNTIIPDFDLVNYFLPPYKA
ALEAGALTVMESYTSINGDPVVASSRILNDLLRSDLNFNGVLLSDWNEIYNLHDFHRVSA
TREEAVATSLKQTSIDMSMVAQDTDFIEYALNMLKENPDQEARLRESAKRVVKIKLQLGL
YDNPVPGKEYVSMVANDKDKETALEMARESIVLLKNEKNVLPLPKSASVFLTGHSADNVG
YQCSGWTFIWQGYSGNEMFNNGISVRKGLENLVGNDSFTYFNGLQVNGSISDADLAKAVE
LASQHEYTIAAI

Enzyme Prediction     

EC	3.2.1.21:1	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	818	1039	1.7e-62	0.9722222222222222
GH3	73	294	2.6e-58	0.9722222222222222

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	7.35e-107	78	704	105	754	beta-glucosidase BglX.
224389	BglX	2.93e-74	23	402	18	372	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
224389	BglX	5.17e-70	744	1147	2	372	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
185053	PRK15098	1.73e-57	713	1176	15	453	beta-glucosidase BglX.
395747	Glyco_hydro_3	4.53e-55	48	329	36	316	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	0.0	1	729	46	769
UIZ29613.1|GH3	0.0	1	729	90	826
UIZ29432.1|GH3	0.0	1	729	45	770
UIZ27116.1|GH3	8.42e-279	1	722	1	724
CCA27737.1|GH3	7.57e-273	22	722	99	808

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	5.54e-125	32	675	65	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
6R5I_A	7.30e-77	78	704	73	722	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	3.43e-76	78	704	73	722	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	3.50e-76	78	704	74	723	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A	6.34e-76	78	704	105	754	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	6.31e-133	1	700	96	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	4.13e-124	32	675	87	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|P33363|BGLX_ECOLI	3.14e-82	35	704	77	754	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	1.10e-81	78	704	105	754	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	1.14e-78	62	707	50	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000076	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_1013-t46_1-p1.