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CAZyme Information: PGTG_13478-t26_1-p1

You are here: Home > Sequence: PGTG_13478-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Puccinia graminis
Lineage Basidiomycota; Pucciniomycetes; ; Pucciniaceae; Puccinia; Puccinia graminis
CAZyme ID PGTG_13478-t26_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
244 DS178308|CGC2 26477.47 6.3228
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PgraminisCRL75-36-700-3 16309 418459 509 15800
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PGTG_13478-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE5 47 232 1.2e-31 0.9894179894179894

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395860 Cutinase 5.58e-17 47 232 2 173
Cutinase.
369775 PE-PPE 2.20e-04 105 192 31 114
PE-PPE domain. This domain is found C terminal to the PE (pfam00934) and PPE (pfam00823) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.54e-19 47 215 29 204
6.54e-19 47 215 29 204
3.43e-18 47 233 29 223
1.04e-17 47 232 31 213
1.51e-17 45 233 31 211

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.32e-20 47 215 3 178
Chain A, Cutinase-like enzyme [Moesziomyces antarcticus],7CC4_B Chain B, Cutinase-like enzyme [Moesziomyces antarcticus],7CW1_A Chain A, Cutinase-like enzyme [Moesziomyces antarcticus],7CW1_B Chain B, Cutinase-like enzyme [Moesziomyces antarcticus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.95e-07 45 233 42 227
Probable carboxylesterase Culp3 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=cut3 PE=3 SV=1
3.95e-07 45 233 42 227
Probable carboxylesterase Culp3 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=cut3 PE=3 SV=1
3.95e-07 45 233 42 227
Probable carboxylesterase Culp3 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=cut3 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000737 0.999273 CS pos: 19-20. Pr: 0.5726

TMHMM  Annotations      help

There is no transmembrane helices in PGTG_13478-t26_1-p1.