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CAZyme Information: PGTG_12122-t26_1-p1

You are here: Home > Sequence: PGTG_12122-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Puccinia graminis
Lineage Basidiomycota; Pucciniomycetes; ; Pucciniaceae; Puccinia; Puccinia graminis
CAZyme ID PGTG_12122-t26_1-p1
CAZy Family GH47
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
349 38650.61 9.0850
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PgraminisCRL75-36-700-3 16309 418459 509 15800
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 56 326 2.4e-74 0.90625

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 5.26e-45 60 324 10 271
Pectinesterase.
178051 PLN02432 9.48e-45 42 347 3 291
putative pectinesterase
178098 PLN02480 2.30e-38 59 324 57 312
Probable pectinesterase
215179 PLN02314 2.75e-36 60 324 288 545
pectinesterase
178346 PLN02745 8.29e-36 25 324 263 556
Putative pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.25e-95 41 342 33 332
8.00e-76 41 342 33 304
5.02e-62 43 346 20 316
2.14e-61 147 347 1 200
2.14e-61 147 347 1 200

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.05e-50 41 347 2 294
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.47e-50 41 347 2 294
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.94e-27 60 324 13 274
Chain A, Pectinesterase 1 [Solanum lycopersicum]
2.83e-25 41 324 2 278
Pectin methylesterase from Carrot [Daucus carota]
7.51e-19 62 319 48 366
The structure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.64e-59 46 347 32 319
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
5.12e-58 46 347 32 319
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
5.12e-58 46 347 32 319
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
8.96e-54 41 347 19 325
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.26e-53 46 347 24 324
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.301009 0.698970 CS pos: 23-24. Pr: 0.4592

TMHMM  Annotations      download full data without filtering help

Start End
4 26