logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PGTG_08313-t26_2-p1

You are here: Home > Sequence: PGTG_08313-t26_2-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Puccinia graminis
Lineage Basidiomycota; Pucciniomycetes; ; Pucciniaceae; Puccinia; Puccinia graminis
CAZyme ID PGTG_08313-t26_2-p1
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
472 52451.49 6.6031
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PgraminisCRL75-36-700-3 16309 418459 509 15800
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PGTG_08313-t26_2-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 121 292 2.4e-18 0.38283828382838286

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226609 ManB2 1.50e-06 81 248 140 272
Beta-mannanase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.04e-154 160 466 1 307
8.59e-129 29 452 44 465
5.57e-108 23 385 28 394
5.66e-43 91 363 68 342
3.56e-42 92 363 123 396

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.02e-06 77 246 55 201
Crystal structure of beta-1,3-xylanase from Vibrio sp. AX-4 [Vibrio sp. AX-4],3VPL_A Crystal structure of a 2-fluoroxylotriosyl complex of the Vibrio sp. AX-4 Beta-1,3-xylanase [Vibrio sp.]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.16e-06 77 246 77 223
Beta-1,3-xylanase XYL4 OS=Vibrio sp. OX=678 GN=xyl4 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000196 0.999754 CS pos: 20-21. Pr: 0.9810

TMHMM  Annotations      help

There is no transmembrane helices in PGTG_08313-t26_2-p1.