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CAZyme Information: PGTG_08012-t26_1-p1

You are here: Home > Sequence: PGTG_08012-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Puccinia graminis
Lineage Basidiomycota; Pucciniomycetes; ; Pucciniaceae; Puccinia; Puccinia graminis
CAZyme ID PGTG_08012-t26_1-p1
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
327 34761.92 9.3331
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PgraminisCRL75-36-700-3 16309 418459 509 15800
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 39 304 5.4e-69 0.90625

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178051 PLN02432 2.14e-39 30 322 8 285
putative pectinesterase
395871 Pectinesterase 1.58e-37 39 302 6 271
Pectinesterase.
215357 PLN02665 4.16e-37 34 322 69 353
pectinesterase family protein
178521 PLN02933 5.06e-32 41 302 226 489
Probable pectinesterase/pectinesterase inhibitor
178372 PLN02773 2.67e-29 34 302 6 275
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.57e-79 28 320 37 332
7.88e-64 28 320 37 304
1.42e-61 14 322 8 314
5.44e-61 23 327 21 331
6.71e-61 11 327 7 316

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.57e-50 29 325 7 294
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.21e-50 29 325 7 294
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
6.14e-23 41 302 11 274
Chain A, Pectinesterase 1 [Solanum lycopersicum]
1.04e-20 41 302 15 278
Pectin methylesterase from Carrot [Daucus carota]
3.04e-13 45 319 18 335
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.80e-52 29 325 33 320
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1
7.95e-52 10 327 4 326
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
1.31e-51 23 327 26 321
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.31e-51 23 327 26 321
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.20e-49 29 325 35 322
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000698 0.999286 CS pos: 23-24. Pr: 0.9728

TMHMM  Annotations      help

There is no transmembrane helices in PGTG_08012-t26_1-p1.