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CAZyme Information: PGTG_03787-t26_1-p1

You are here: Home > Sequence: PGTG_03787-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Puccinia graminis
Lineage Basidiomycota; Pucciniomycetes; ; Pucciniaceae; Puccinia; Puccinia graminis
CAZyme ID PGTG_03787-t26_1-p1
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
326 34452.34 9.6143
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PgraminisCRL75-36-700-3 16309 418459 509 15800
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 39 302 1.3e-65 0.9027777777777778

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178051 PLN02432 1.72e-37 31 301 10 265
putative pectinesterase
215357 PLN02665 6.03e-36 23 301 63 333
pectinesterase family protein
178113 PLN02497 1.76e-31 1 301 1 299
probable pectinesterase
215367 PLN02682 3.95e-29 28 301 67 340
pectinesterase family protein
395871 Pectinesterase 1.05e-28 41 301 8 271
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.37e-82 27 319 37 332
2.71e-64 27 319 37 304
2.08e-62 11 324 7 314
3.18e-62 23 324 25 327
1.12e-58 9 324 4 324

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.06e-42 23 324 2 294
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.48e-42 23 324 2 294
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.59e-18 41 301 15 278
Pectin methylesterase from Carrot [Daucus carota]
2.04e-12 117 296 149 366
The structure of rice weevil pectin methyl esterase [Sitophilus oryzae]
4.42e-12 33 318 7 335
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.43e-51 9 324 3 325
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.52e-49 24 324 28 319
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.52e-49 24 324 28 319
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.52e-47 9 324 3 324
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
4.97e-47 24 324 28 319
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001127 0.998854 CS pos: 23-24. Pr: 0.9408

TMHMM  Annotations      help

There is no transmembrane helices in PGTG_03787-t26_1-p1.