logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: P175DRAFT_0453786-t39_1-p1

You are here: Home > Sequence: P175DRAFT_0453786-t39_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus ochraceoroseus
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus ochraceoroseus
CAZyme ID P175DRAFT_0453786-t39_1-p1
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
362 MSFN02000002|CGC31 37413.87 6.4870
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AochraceoroseusIBT24754 9070 1392256 153 8917
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 40 362 1.1e-70 0.9661538461538461

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.08e-146 45 362 1 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 1.33e-25 96 355 157 417
polygalacturonase ADPG
215426 PLN02793 5.36e-22 45 353 80 406
Probable polygalacturonase
215540 PLN03010 8.09e-22 116 355 144 388
polygalacturonase
178580 PLN03003 1.57e-21 107 352 123 365
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.19e-215 1 362 1 362
3.19e-215 1 362 1 362
1.30e-214 1 362 1 362
1.30e-214 1 362 1 362
1.30e-214 1 362 1 362

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.47e-213 1 362 1 362
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]
2.77e-180 24 362 5 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.60e-179 24 362 5 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
2.29e-177 29 362 2 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.69e-153 29 358 2 333
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.66e-216 1 362 1 362
Probable endopolygalacturonase II OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=pgaII PE=3 SV=2
2.30e-215 1 362 1 362
Endopolygalacturonase II OS=Aspergillus niger OX=5061 PE=1 SV=1
2.30e-215 1 362 1 362
Endopolygalacturonase II OS=Aspergillus tubingensis OX=5068 GN=pgaII PE=1 SV=1
5.41e-214 1 362 1 362
Endopolygalacturonase II OS=Aspergillus awamori OX=105351 GN=pgaII PE=1 SV=1
1.27e-212 1 362 1 362
Endopolygalacturonase II OS=Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7) OX=380704 GN=pgaII PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000305 0.999652 CS pos: 26-27. Pr: 0.9408

TMHMM  Annotations      help

There is no transmembrane helices in P175DRAFT_0453786-t39_1-p1.