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CAZyme Information: P174DRAFT_499715-t37_1-p1

You are here: Home > Sequence: P174DRAFT_499715-t37_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus novofumigatus
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus novofumigatus
CAZyme ID P174DRAFT_499715-t37_1-p1
CAZy Family GT2
CAZyme Description putative pectate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
321 MSZS01000001|CGC12 33788.33 6.7009
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnovofumigatusIBT16806 11729 1392255 197 11532
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2:30

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 77 258 2.5e-92 0.988950276243094

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 2.11e-65 81 262 5 190
Amb_all domain.
226384 PelB 1.12e-50 73 316 77 340
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 1.41e-39 84 258 26 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.81e-162 12 321 14 323
3.98e-161 12 321 14 323
3.98e-161 12 321 14 323
1.14e-160 12 321 14 323
1.14e-160 12 321 14 323

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.35e-41 38 316 6 321
Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1.74e-29 35 262 7 280
Chain A, PECTATE LYASE E [Dickeya chrysanthemi]
1.35e-26 88 237 128 302
Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
6.38e-26 63 258 44 287
Chain A, Pectate lyase A [Dickeya chrysanthemi],1OOC_B Chain B, Pectate lyase A [Dickeya chrysanthemi],1PE9_A Chain A, Pectate lyase A [Dickeya chrysanthemi],1PE9_B Chain B, Pectate lyase A [Dickeya chrysanthemi]
3.00e-24 63 258 44 287
Chain A, Pectate lyase [Dickeya chrysanthemi],1JRG_B Chain B, Pectate lyase [Dickeya chrysanthemi],1JTA_A Chain A, pectate lyase A [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.12e-206 1 321 1 321
Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyA PE=3 SV=1
5.94e-202 1 321 1 321
Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1
3.43e-201 1 321 1 321
Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1
1.74e-162 12 321 14 323
Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1
2.02e-161 12 321 14 323
Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000283 0.999691 CS pos: 30-31. Pr: 0.7368

TMHMM  Annotations      help

There is no transmembrane helices in P174DRAFT_499715-t37_1-p1.