logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: P174DRAFT_457101-t37_1-p1

You are here: Home > Sequence: P174DRAFT_457101-t37_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus novofumigatus
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus novofumigatus
CAZyme ID P174DRAFT_457101-t37_1-p1
CAZy Family GH5
CAZyme Description pectin lyase-like protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
478 MSZS01000002|CGC3 51553.92 4.8861
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnovofumigatusIBT16806 11729 1392255 197 11532
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in P174DRAFT_457101-t37_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 68 386 9.4e-49 0.9076923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.28e-21 148 379 61 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 5.18e-17 176 351 187 369
Probable polygalacturonase
177865 PLN02218 6.91e-17 40 352 73 384
polygalacturonase ADPG
215540 PLN03010 5.79e-16 176 401 167 396
polygalacturonase
227721 Pgu1 9.12e-16 19 307 68 390
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.45e-294 13 478 12 487
9.45e-294 13 478 12 487
2.53e-287 6 478 6 489
8.29e-269 13 466 12 475
3.37e-268 13 466 12 475

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.49e-86 17 471 1 418
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
1.28e-08 44 373 20 366
Chain A, POLYGALACTURONASE [Pectobacterium carotovorum]
2.09e-07 206 365 173 331
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]
1.05e-06 116 335 41 273
Endopolygalacturonase I from Stereum purpureum at 0.96 A resolution [Chondrostereum purpureum],1KCC_A Endopolygalacturonase I from Stereum purpureum complexed with a galacturonate at 1.00 A resolution. [Chondrostereum purpureum],1KCD_A Endopolygalacturonase I from Stereum purpureum complexed with two galacturonate at 1.15 A resolution. [Chondrostereum purpureum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.54e-92 6 471 7 436
Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2
1.66e-91 3 466 6 432
Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
4.66e-91 3 466 6 432
Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1
7.62e-90 3 471 8 441
Probable rhamnogalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=rhgB PE=3 SV=1
1.86e-89 3 471 8 441
Probable rhamnogalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rhgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000210 0.999736 CS pos: 16-17. Pr: 0.9322

TMHMM  Annotations      help

There is no transmembrane helices in P174DRAFT_457101-t37_1-p1.