logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: P174DRAFT_418292-t37_1-p1

You are here: Home > Sequence: P174DRAFT_418292-t37_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus novofumigatus
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus novofumigatus
CAZyme ID P174DRAFT_418292-t37_1-p1
CAZy Family GH13|CBM20
CAZyme Description putative pectin lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
380 MSZS01000002|CGC16 39705.31 8.1381
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnovofumigatusIBT16806 11729 1392255 197 11532
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:25

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 114 298 1e-89 0.9893048128342246

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 9.03e-57 111 300 1 190
Amb_all domain.
226384 PelB 3.67e-13 124 298 97 275
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 4.37e-13 124 296 30 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.17e-219 1 380 1 376
6.89e-218 1 380 1 376
1.46e-213 1 380 1 380
6.66e-212 1 377 1 377
2.66e-210 1 380 1 382

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.75e-196 21 380 1 359
Pectin Lyase A [Aspergillus niger]
4.77e-194 21 380 1 359
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
9.62e-194 22 379 2 359
Pectin Lyase B [Aspergillus niger]
1.02e-08 124 302 76 284
Chain A, PECTATE LYASE E [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.78e-267 1 380 1 380
Probable pectin lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelA PE=3 SV=1
5.11e-216 1 380 1 378
Probable pectin lyase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelB PE=3 SV=1
5.11e-216 1 380 1 378
Probable pectin lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelA PE=3 SV=1
2.08e-215 1 380 1 378
Probable pectin lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pelA PE=3 SV=2
1.18e-212 1 377 1 377
Pectin lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000296 0.999680 CS pos: 20-21. Pr: 0.9605

TMHMM  Annotations      download full data without filtering help

Start End
5 27