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CAZyme Information: P170DRAFT_507268-t37_1-p1

You are here: Home > Sequence: P170DRAFT_507268-t37_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus steynii
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus steynii
CAZyme ID P170DRAFT_507268-t37_1-p1
CAZy Family GT58
CAZyme Description pectin lyase-like protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
487 53132.27 4.5883
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AsteyniiIBT23096 13430 1392250 235 13195
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in P170DRAFT_507268-t37_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 144 394 3.3e-50 0.7353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.25e-22 157 388 61 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 1.09e-19 16 360 36 369
Probable polygalacturonase
177865 PLN02218 1.84e-18 32 360 66 383
polygalacturonase ADPG
215540 PLN03010 2.10e-17 35 410 48 396
polygalacturonase
227721 Pgu1 3.18e-17 31 318 80 392
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.28e-301 6 487 5 487
1.89e-300 6 487 5 487
1.31e-296 3 487 8 489
3.03e-278 6 475 5 475
1.23e-277 6 475 5 475

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.48e-92 16 479 1 417
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
2.07e-09 215 362 155 303
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.07e-09 215 362 155 303
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
4.70e-09 215 362 147 295
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
6.36e-09 174 360 99 294
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.20e-100 7 479 13 442
Probable rhamnogalacturonase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgE PE=3 SV=2
3.11e-98 6 479 6 435
Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2
5.11e-96 13 475 16 432
Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
1.43e-95 13 475 16 432
Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1
5.04e-94 13 475 20 439
Probable rhamnogalacturonase E OS=Aspergillus niger OX=5061 GN=rhgE PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000244 0.999724 CS pos: 15-16. Pr: 0.9710

TMHMM  Annotations      help

There is no transmembrane helices in P170DRAFT_507268-t37_1-p1.