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CAZyme Information: P170DRAFT_464601-t37_1-p1

You are here: Home > Sequence: P170DRAFT_464601-t37_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus steynii
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus steynii
CAZyme ID P170DRAFT_464601-t37_1-p1
CAZy Family GH88
CAZyme Description RGase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
502 MSFO01000004|CGC13 53421.15 4.4063
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AsteyniiIBT23096 13430 1392250 235 13195
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.171:11

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 66 376 6.8e-58 0.963076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 6.44e-23 142 375 75 315
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 2.42e-20 43 377 48 391
polygalacturonase
215120 PLN02188 1.60e-18 8 375 5 390
polygalacturonase/glycoside hydrolase family protein
177865 PLN02218 6.70e-15 38 375 64 418
polygalacturonase ADPG
165802 PLN02155 8.55e-15 43 377 29 380
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.85e-266 1 469 1 469
7.85e-266 1 469 1 469
4.52e-265 1 469 1 469
3.16e-258 1 447 1 447
3.16e-258 1 447 1 447

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.22e-220 22 443 1 420
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
3.63e-26 49 374 23 373
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
1.67e-11 199 347 167 319
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.37e-267 4 470 4 469
Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1
1.39e-266 1 469 1 469
Probable rhamnogalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgB PE=3 SV=1
1.88e-266 1 455 1 455
Probable rhamnogalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=rhgB PE=3 SV=1
2.58e-265 1 455 1 455
Probable rhamnogalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rhgB PE=3 SV=1
3.09e-265 1 455 1 455
Probable rhamnogalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rhgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000370 0.999618 CS pos: 19-20. Pr: 0.9757

TMHMM  Annotations      help

There is no transmembrane helices in P170DRAFT_464601-t37_1-p1.