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CAZyme Information: P170DRAFT_452486-t37_1-p1

You are here: Home > Sequence: P170DRAFT_452486-t37_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus steynii
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus steynii
CAZyme ID P170DRAFT_452486-t37_1-p1
CAZy Family GH53
CAZyme Description putative pectin lyase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
375 39654.29 4.1363
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AsteyniiIBT23096 13430 1392250 235 13195
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 109 292 9.9e-77 0.9732620320855615

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 2.62e-48 109 296 3 190
Amb_all domain.
226384 PelB 8.49e-16 112 375 91 344
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 2.98e-08 114 292 26 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.17e-205 1 375 1 375
1.17e-205 1 375 1 375
1.17e-205 1 375 1 375
1.17e-205 1 375 1 375
1.93e-204 1 375 1 375

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.14e-113 23 375 3 359
Pectin Lyase A [Aspergillus niger]
5.99e-111 23 375 3 359
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
3.28e-97 23 374 3 359
Pectin Lyase B [Aspergillus niger]
2.00e-12 108 268 54 213
Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.08e-206 1 375 1 375
Probable pectin lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelC PE=3 SV=1
2.08e-206 1 375 1 375
Probable pectin lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelA PE=3 SV=1
5.16e-130 20 371 17 370
Probable pectin lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelC PE=3 SV=2
3.90e-127 15 375 13 373
Probable pectin lyase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelC PE=3 SV=1
2.63e-126 15 375 13 373
Probable pectin lyase C OS=Aspergillus niger OX=5061 GN=pelC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000227 0.999747 CS pos: 20-21. Pr: 0.9781

TMHMM  Annotations      help

There is no transmembrane helices in P170DRAFT_452486-t37_1-p1.