logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: P170DRAFT_416182-t37_1-p1

You are here: Home > Sequence: P170DRAFT_416182-t37_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus steynii
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus steynii
CAZyme ID P170DRAFT_416182-t37_1-p1
CAZy Family GH18
CAZyme Description pectin lyase-like protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
476 53107.84 5.8616
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AsteyniiIBT23096 13430 1392250 235 13195
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in P170DRAFT_416182-t37_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 156 445 6.9e-42 0.8

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227721 Pgu1 2.91e-07 118 303 128 337
Polygalacturonase [Carbohydrate transport and metabolism].
395231 Glyco_hydro_28 1.79e-05 212 442 90 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 2.60e-05 207 334 132 256
Probable polygalacturonase At3g15720
215540 PLN03010 3.45e-04 211 319 159 260
polygalacturonase
215426 PLN02793 0.001 252 369 222 330
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.99e-245 2 474 5 485
8.79e-207 3 475 8 474
2.58e-192 3 474 7 476
2.58e-192 3 474 7 476
2.58e-192 3 474 7 476

PDB Hits      help

P170DRAFT_416182-t37_1-p1 has no PDB hit.

Swiss-Prot Hits      help

P170DRAFT_416182-t37_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000051 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in P170DRAFT_416182-t37_1-p1.