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CAZyme Information: P168DRAFT_284794-t37_1-p1

You are here: Home > Sequence: P168DRAFT_284794-t37_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus campestris
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus campestris
CAZyme ID P168DRAFT_284794-t37_1-p1
CAZy Family GH25
CAZyme Description choline dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
647 69486.37 4.6411
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AcampestrisIBT28561 9929 1392248 173 9756
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in P168DRAFT_284794-t37_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 25 641 1.1e-95 0.9929577464788732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 5.55e-77 25 640 6 532
choline dehydrogenase; Validated
225186 BetA 2.44e-73 25 641 8 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 1.74e-32 500 635 5 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 2.86e-19 25 622 56 559
Protein HOTHEAD
366272 GMC_oxred_N 1.06e-18 118 393 11 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 643 1 645
0.0 1 643 1 645
0.0 1 643 1 645
0.0 1 643 1 645
0.0 1 645 1 645

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.46e-45 25 636 8 557
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
3.36e-45 25 636 8 557
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
3.36e-45 25 636 8 557
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
3.36e-45 25 636 8 557
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
3.46e-45 25 636 84 633
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.35e-49 25 639 3 531
Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) OX=502801 GN=betA PE=3 SV=1
2.35e-49 25 639 3 531
Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) OX=273123 GN=betA PE=3 SV=1
8.37e-49 25 639 3 531
Oxygen-dependent choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=betA PE=3 SV=1
8.37e-49 25 639 3 531
Oxygen-dependent choline dehydrogenase OS=Yersinia pestis OX=632 GN=betA PE=3 SV=1
8.37e-49 25 639 3 531
Oxygen-dependent choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001712 0.998257 CS pos: 19-20. Pr: 0.9523

TMHMM  Annotations      help

There is no transmembrane helices in P168DRAFT_284794-t37_1-p1.